Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 AC079178.1-201ENST00000420915 656 ntBASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 CNN2P10-201ENST00000443067 918 ntBASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 HSPB1P2-201ENST00000448722 546 ntBASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 RN7SL769P-201ENST00000469386 295 ntBASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 HIST2H2BC-201ENST00000498492 580 ntBASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA1Q9Y5H4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 KLF2P2-201ENST00000416807 1039 ntBASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA1Q9Y5H4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 AL008707.1-201ENST00000422498 534 ntBASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA1Q9Y5H4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms