Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.69□□□□□ -0.38
Gabpb1Q00420 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.69□□□□□ -0.38
Gabpb1Q00420 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gabpb1Q00420 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.68□□□□□ -0.38
Gabpb1Q00420 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.68□□□□□ -0.38
Gabpb1Q00420 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.68□□□□□ -0.38
Gabpb1Q00420 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Gm12314-201ENSMUST00000118104 538 ntBASIC12.68□□□□□ -0.38
Gabpb1Q00420 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Mir1982-201ENSMUST00000157368 74 ntBASIC12.68□□□□□ -0.38
Gabpb1Q00420 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gabpb1Q00420 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Gm18304-201ENSMUST00000189162 546 ntBASIC12.68□□□□□ -0.38
Gabpb1Q00420 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gabpb1Q00420 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Gm13736-201ENSMUST00000119272 253 ntBASIC12.67□□□□□ -0.38
Gabpb1Q00420 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.67□□□□□ -0.38
Gabpb1Q00420 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.67□□□□□ -0.38
Gabpb1Q00420 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Gm8227-201ENSMUST00000223306 571 ntBASIC12.67□□□□□ -0.38
Gabpb1Q00420 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.67□□□□□ -0.38
Gabpb1Q00420 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gabpb1Q00420 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gabpb1Q00420 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms