Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a4Q9QZR9 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.21□□□□□ -0.46
Col4a4Q9QZR9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a4Q9QZR9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a4Q9QZR9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.46
Col4a4Q9QZR9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a4Q9QZR9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Gm15620-201ENSMUST00000122949 270 ntBASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Gm8451-201ENSMUST00000170338 447 ntBASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Gm4034-201ENSMUST00000187674 480 ntBASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Gm43671-201ENSMUST00000200422 433 ntBASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Gm2448-201ENSMUST00000207080 559 ntBASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Gm45085-201ENSMUST00000209100 441 ntBASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Gm7536-201ENSMUST00000077389 444 ntBASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Gm5453-201ENSMUST00000080866 447 ntBASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a4Q9QZR9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm11560-201ENSMUST00000117567 948 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm9673-201ENSMUST00000119287 781 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm8459-201ENSMUST00000162504 760 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm28937-201ENSMUST00000185413 695 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm29400-201ENSMUST00000187208 695 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm28662-201ENSMUST00000188446 695 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm28251-201ENSMUST00000188835 695 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm37318-201ENSMUST00000194325 695 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm38017-201ENSMUST00000194768 695 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm37287-201ENSMUST00000195449 695 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm37793-201ENSMUST00000195548 695 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm4978-201ENSMUST00000071565 801 ntBASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a4Q9QZR9 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms