Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf111Q99ML9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.47
Rnf111Q99ML9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.15□□□□□ -0.47
Rnf111Q99ML9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
Rnf111Q99ML9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.15□□□□□ -0.47
Rnf111Q99ML9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf111Q99ML9 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Gm13813-201ENSMUST00000120998 787 ntBASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Gm29649-201ENSMUST00000185649 419 ntBASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf111Q99ML9 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Gm26185-201ENSMUST00000157692 266 ntBASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Gm4271-201ENSMUST00000174444 973 ntBASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Gm9630-201ENSMUST00000178304 885 ntBASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf111Q99ML9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms