Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Gm37785-201ENSMUST00000195783 2408 ntBASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb3Q91XZ7 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Gm11478-201ENSMUST00000117851 599 ntBASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Gm15061-201ENSMUST00000121076 1046 ntBASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Mir7221-201ENSMUST00000184009 72 ntBASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Gm18944-201ENSMUST00000207672 643 ntBASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 AC158388.1-201ENSMUST00000225441 256 ntBASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 AC154616.1-201ENSMUST00000226995 804 ntBASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhb3Q91XZ7 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Mir874-201ENSMUST00000104769 76 ntBASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Gm11893-201ENSMUST00000117829 491 ntBASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Gm9440-201ENSMUST00000119667 539 ntBASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Gm12138-201ENSMUST00000122180 951 ntBASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 AC153522.1-201ENSMUST00000220047 1090 ntBASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 AC162940.1-201ENSMUST00000224745 1167 ntBASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb3Q91XZ7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms