Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 AL583805.1-201ENST00000391389 531 ntBASIC21.49■■□□□ 1.03
UBR1Q8IWV7 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 AC105137.3-201ENST00000617588 984 ntBASIC21.49■■□□□ 1.03
UBR1Q8IWV7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
UBR1Q8IWV7 AC018629.1-201ENST00000623381 1736 ntBASIC21.49■■□□□ 1.03
UBR1Q8IWV7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 AC015909.3-201ENST00000572855 1794 ntBASIC21.48■■□□□ 1.03
UBR1Q8IWV7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 RNA5SP359-201ENST00000364838 113 ntBASIC21.48■■□□□ 1.03
UBR1Q8IWV7 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 AL357563.1-201ENST00000404728 395 ntBASIC21.48■■□□□ 1.03
UBR1Q8IWV7 AC010234.1-201ENST00000494599 870 ntBASIC21.48■■□□□ 1.03
UBR1Q8IWV7 ORAOV1P1-201ENST00000503108 395 ntBASIC21.48■■□□□ 1.03
UBR1Q8IWV7 AL022344.2-201ENST00000568976 968 ntBASIC21.48■■□□□ 1.03
UBR1Q8IWV7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 AC022211.2-201ENST00000585075 2527 ntBASIC21.48■■□□□ 1.03
UBR1Q8IWV7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBR1Q8IWV7 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 HPGD-203ENST00000422112 805 ntTSL 2 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 AC018463.1-201ENST00000456674 917 ntBASIC21.47■■□□□ 1.03
UBR1Q8IWV7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 MRPL22P1-201ENST00000505398 616 ntBASIC21.47■■□□□ 1.03
UBR1Q8IWV7 AC008723.1-201ENST00000506922 207 ntBASIC21.47■■□□□ 1.03
UBR1Q8IWV7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 AC027237.1-201ENST00000560942 655 ntBASIC21.47■■□□□ 1.03
UBR1Q8IWV7 AL161773.1-201ENST00000624845 863 ntBASIC21.47■■□□□ 1.03
UBR1Q8IWV7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 AC099398.1-201ENST00000567919 2776 ntBASIC21.47■■□□□ 1.03
UBR1Q8IWV7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 ZBTB45P1-201ENST00000452761 1456 ntBASIC21.47■■□□□ 1.03
UBR1Q8IWV7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 AC112504.1-201ENST00000623415 1841 ntBASIC21.47■■□□□ 1.03
UBR1Q8IWV7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC21.47■■□□□ 1.03
UBR1Q8IWV7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 IDS-203ENST00000428056 1213 ntTSL 2 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 CHCHD2P9-201ENST00000461726 456 ntBASIC21.46■■□□□ 1.03
UBR1Q8IWV7 RN7SL81P-201ENST00000493781 261 ntBASIC21.46■■□□□ 1.03
UBR1Q8IWV7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 AL132780.4-201ENST00000624870 1135 ntBASIC21.46■■□□□ 1.03
UBR1Q8IWV7 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 AC080080.1-201ENST00000625121 2420 ntBASIC21.46■■□□□ 1.03
UBR1Q8IWV7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms