Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.11□□□□□ -0.63
Rab42Q0PD08 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Mir6977-201ENSMUST00000184960 64 ntBASIC11.11□□□□□ -0.63
Rab42Q0PD08 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Gm28631-201ENSMUST00000190740 334 ntBASIC11.11□□□□□ -0.63
Rab42Q0PD08 Gm10576-201ENSMUST00000191927 825 ntBASIC11.11□□□□□ -0.63
Rab42Q0PD08 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab42Q0PD08 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.1□□□□□ -0.63
Rab42Q0PD08 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Gm27437-201ENSMUST00000183429 107 ntBASIC11.1□□□□□ -0.63
Rab42Q0PD08 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Gm42550-201ENSMUST00000201553 960 ntBASIC11.1□□□□□ -0.63
Rab42Q0PD08 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.1□□□□□ -0.63
Rab42Q0PD08 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab42Q0PD08 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab42Q0PD08 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.09□□□□□ -0.63
Rab42Q0PD08 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.09□□□□□ -0.63
Rab42Q0PD08 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab42Q0PD08 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.09□□□□□ -0.63
Rab42Q0PD08 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rab42Q0PD08 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms