Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm43433-201ENSMUST00000196573 481 ntBASIC10.97□□□□□ -0.65
Upk2P38575 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.97□□□□□ -0.65
Upk2P38575 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Upk2P38575 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.97□□□□□ -0.65
Upk2P38575 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.97□□□□□ -0.65
Upk2P38575 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Upk2P38575 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk2P38575 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk2P38575 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.96□□□□□ -0.65
Upk2P38575 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Upk2P38575 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.96□□□□□ -0.65
Upk2P38575 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk2P38575 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk2P38575 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Gm12314-201ENSMUST00000118104 538 ntBASIC10.96□□□□□ -0.65
Upk2P38575 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.96□□□□□ -0.65
Upk2P38575 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.96□□□□□ -0.65
Upk2P38575 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk2P38575 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk2P38575 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk2P38575 Gm27390-201ENSMUST00000184516 176 ntBASIC10.96□□□□□ -0.65
Upk2P38575 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk2P38575 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Upk2P38575 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk2P38575 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk2P38575 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk2P38575 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk2P38575 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk2P38575 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk2P38575 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk2P38575 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk2P38575 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk2P38575 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.96□□□□□ -0.66
Upk2P38575 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.96□□□□□ -0.66
Upk2P38575 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.96□□□□□ -0.66
Upk2P38575 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk2P38575 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk2P38575 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.95□□□□□ -0.66
Upk2P38575 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.95□□□□□ -0.66
Upk2P38575 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Upk2P38575 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Snora78-201ENSMUST00000158630 128 ntBASIC10.95□□□□□ -0.66
Upk2P38575 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Gm5370-201ENSMUST00000187187 574 ntBASIC10.95□□□□□ -0.66
Upk2P38575 Gm37008-201ENSMUST00000195712 319 ntBASIC10.95□□□□□ -0.66
Upk2P38575 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Upk2P38575 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.95□□□□□ -0.66
Upk2P38575 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.95□□□□□ -0.66
Upk2P38575 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk2P38575 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms