Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col2a1P28481 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Col2a1P28481 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Col2a1P28481 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.01□□□□□ -0.17
Col2a1P28481 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.01□□□□□ -0.17
Col2a1P28481 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Col2a1P28481 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col2a1P28481 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.01□□□□□ -0.17
Col2a1P28481 Gm38117-201ENSMUST00000194653 939 ntBASIC14.01□□□□□ -0.17
Col2a1P28481 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.01□□□□□ -0.17
Col2a1P28481 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.01□□□□□ -0.17
Col2a1P28481 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col2a1P28481 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col2a1P28481 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col2a1P28481 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Col2a1P28481 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col2a1P28481 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col2a1P28481 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Col2a1P28481 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col2a1P28481 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14□□□□□ -0.17
Col2a1P28481 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Col2a1P28481 Gm7467-201ENSMUST00000185173 652 ntBASIC14□□□□□ -0.17
Col2a1P28481 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14□□□□□ -0.17
Col2a1P28481 Gm8285-201ENSMUST00000208293 759 ntBASIC14□□□□□ -0.17
Col2a1P28481 Gm45484-201ENSMUST00000210310 1141 ntBASIC14□□□□□ -0.17
Col2a1P28481 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14□□□□□ -0.17
Col2a1P28481 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col2a1P28481 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14□□□□□ -0.17
Col2a1P28481 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14□□□□□ -0.17
Col2a1P28481 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col2a1P28481 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col2a1P28481 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col2a1P28481 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col2a1P28481 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Col2a1P28481 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Col2a1P28481 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 Gm11663-201ENSMUST00000117888 290 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 Gm13611-201ENSMUST00000118269 318 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 Gm15610-201ENSMUST00000120584 195 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.99□□□□□ -0.17
Col2a1P28481 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Gm43916-201ENSMUST00000205062 967 ntBASIC13.99□□□□□ -0.17
Col2a1P28481 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col2a1P28481 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col2a1P28481 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.99□□□□□ -0.17
Col2a1P28481 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms