Protein–RNA interactions for Protein: Q9Z1J2

Nek4, Serine/threonine-protein kinase Nek4, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek4Q9Z1J2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nek4Q9Z1J2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Nek4Q9Z1J2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Nek4Q9Z1J2 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.24■□□□□ 0.03
Nek4Q9Z1J2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nek4Q9Z1J2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nek4Q9Z1J2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nek4Q9Z1J2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nek4Q9Z1J2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nek4Q9Z1J2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nek4Q9Z1J2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Gm1335-201ENSMUST00000121653 386 ntBASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Gm43365-201ENSMUST00000196522 2106 ntBASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nek4Q9Z1J2 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nek4Q9Z1J2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Rmrp-201ENSMUST00000157463 271 ntBASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Gm9022-201ENSMUST00000182482 992 ntBASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nek4Q9Z1J2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nek4Q9Z1J2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
Nek4Q9Z1J2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms