Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vps39Q8R5L3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Gm12363-201ENSMUST00000122250 668 ntBASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps39Q8R5L3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Gm5035-201ENSMUST00000215581 927 ntBASIC12.55□□□□□ -0.4
Vps39Q8R5L3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Gm6091-201ENSMUST00000098307 165 ntBASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps39Q8R5L3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Gm12384-201ENSMUST00000119228 919 ntBASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Gm14760-201ENSMUST00000121831 999 ntBASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Gm26927-201ENSMUST00000182385 965 ntBASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Gm7561-201ENSMUST00000211203 886 ntBASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Gm32025-201ENSMUST00000217960 307 ntBASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps39Q8R5L3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms