Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Mir3102-201ENSMUST00000175555 104 ntBASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab11fip3Q8CHD8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rab11fip3Q8CHD8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rab11fip3Q8CHD8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rab11fip3Q8CHD8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Rab11fip3Q8CHD8 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rab11fip3Q8CHD8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rab11fip3Q8CHD8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.21■□□□□ 0.18
Rab11fip3Q8CHD8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Gm18626-201ENSMUST00000221512 1409 ntBASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Gm17812-201ENSMUST00000204935 318 ntBASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab11fip3Q8CHD8 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Gm43868-201ENSMUST00000205187 2114 ntBASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab11fip3Q8CHD8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms