Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.03□□□□□ -0.16
Nedd1P33215 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.03□□□□□ -0.16
Nedd1P33215 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nedd1P33215 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nedd1P33215 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.03□□□□□ -0.16
Nedd1P33215 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.03□□□□□ -0.16
Nedd1P33215 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Nedd1P33215 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nedd1P33215 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nedd1P33215 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nedd1P33215 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nedd1P33215 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nedd1P33215 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nedd1P33215 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nedd1P33215 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nedd1P33215 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nedd1P33215 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.02□□□□□ -0.16
Nedd1P33215 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.02□□□□□ -0.17
Nedd1P33215 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.02□□□□□ -0.17
Nedd1P33215 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.02□□□□□ -0.17
Nedd1P33215 Gm19187-201ENSMUST00000206781 892 ntBASIC14.02□□□□□ -0.17
Nedd1P33215 Gm44651-201ENSMUST00000207343 372 ntBASIC14.02□□□□□ -0.17
Nedd1P33215 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.02□□□□□ -0.17
Nedd1P33215 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.02□□□□□ -0.17
Nedd1P33215 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd1P33215 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nedd1P33215 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nedd1P33215 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd1P33215 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.02□□□□□ -0.17
Nedd1P33215 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd1P33215 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd1P33215 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd1P33215 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd1P33215 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.02□□□□□ -0.17
Nedd1P33215 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd1P33215 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nedd1P33215 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.01□□□□□ -0.17
Nedd1P33215 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nedd1P33215 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nedd1P33215 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.01□□□□□ -0.17
Nedd1P33215 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.01□□□□□ -0.17
Nedd1P33215 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.01□□□□□ -0.17
Nedd1P33215 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nedd1P33215 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.01□□□□□ -0.17
Nedd1P33215 Gm25700-201ENSMUST00000177693 110 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nedd1P33215 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.01□□□□□ -0.17
Nedd1P33215 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 Gm9230-201ENSMUST00000188228 532 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 Gm45186-201ENSMUST00000206874 478 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 Gm18056-201ENSMUST00000207670 568 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 Gm18061-201ENSMUST00000208350 562 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 Gm18063-201ENSMUST00000208529 568 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 Gm18052-201ENSMUST00000208750 559 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Nedd1P33215 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nedd1P33215 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nedd1P33215 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.01□□□□□ -0.17
Nedd1P33215 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nedd1P33215 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms