Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Hoxc6P10629 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.87□□□□□ -0.19
Hoxc6P10629 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Gm23596-201ENSMUST00000104304 132 ntBASIC13.87□□□□□ -0.19
Hoxc6P10629 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Hoxc6P10629 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Hoxc6P10629 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.87□□□□□ -0.19
Hoxc6P10629 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Hoxc6P10629 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.87□□□□□ -0.19
Hoxc6P10629 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.87□□□□□ -0.19
Hoxc6P10629 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.87□□□□□ -0.19
Hoxc6P10629 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.87□□□□□ -0.19
Hoxc6P10629 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.87□□□□□ -0.19
Hoxc6P10629 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc6P10629 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.86□□□□□ -0.19
Hoxc6P10629 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.86□□□□□ -0.19
Hoxc6P10629 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.86□□□□□ -0.19
Hoxc6P10629 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hoxc6P10629 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Hoxc6P10629 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hoxc6P10629 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.86□□□□□ -0.19
Hoxc6P10629 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.86□□□□□ -0.19
Hoxc6P10629 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.86□□□□□ -0.19
Hoxc6P10629 Gm9022-201ENSMUST00000182482 992 ntBASIC13.86□□□□□ -0.19
Hoxc6P10629 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Gm5733-201ENSMUST00000190232 939 ntBASIC13.86□□□□□ -0.19
Hoxc6P10629 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Hoxc6P10629 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Hoxc6P10629 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.86□□□□□ -0.19
Hoxc6P10629 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Hoxc6P10629 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc6P10629 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hoxc6P10629 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.85□□□□□ -0.19
Hoxc6P10629 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc6P10629 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.85□□□□□ -0.19
Hoxc6P10629 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc6P10629 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.85□□□□□ -0.19
Hoxc6P10629 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc6P10629 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc6P10629 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc6P10629 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Hoxc6P10629 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc6P10629 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc6P10629 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc6P10629 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc6P10629 Gm24231-201ENSMUST00000104315 133 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms