Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.76□□□□□ -0.21
UBCP0CG48 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.76□□□□□ -0.21
UBCP0CG48 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
UBCP0CG48 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
UBCP0CG48 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
UBCP0CG48 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.76□□□□□ -0.21
UBCP0CG48 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.76□□□□□ -0.21
UBCP0CG48 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
UBCP0CG48 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
UBCP0CG48 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.76□□□□□ -0.21
UBCP0CG48 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
UBCP0CG48 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.76□□□□□ -0.21
UBCP0CG48 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UBCP0CG48 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
UBCP0CG48 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
UBCP0CG48 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
UBCP0CG48 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.76□□□□□ -0.21
UBCP0CG48 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.76□□□□□ -0.21
UBCP0CG48 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.76□□□□□ -0.21
UBCP0CG48 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 HNRNPUP1-201ENST00000554987 333 ntBASIC13.76□□□□□ -0.21
UBCP0CG48 AC243562.1-201ENST00000560672 389 ntBASIC13.76□□□□□ -0.21
UBCP0CG48 AC106730.1-201ENST00000566722 1090 ntBASIC13.76□□□□□ -0.21
UBCP0CG48 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.76□□□□□ -0.21
UBCP0CG48 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.76□□□□□ -0.21
UBCP0CG48 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.76□□□□□ -0.21
UBCP0CG48 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.76□□□□□ -0.21
UBCP0CG48 BX640515.1-201ENST00000617215 977 ntBASIC13.76□□□□□ -0.21
UBCP0CG48 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.76□□□□□ -0.21
UBCP0CG48 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.76□□□□□ -0.21
UBCP0CG48 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.76□□□□□ -0.21
UBCP0CG48 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UBCP0CG48 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
UBCP0CG48 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.76□□□□□ -0.21
UBCP0CG48 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UBCP0CG48 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
UBCP0CG48 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.76□□□□□ -0.21
UBCP0CG48 AC023024.2-201ENST00000623561 1993 ntBASIC13.76□□□□□ -0.21
UBCP0CG48 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UBCP0CG48 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
UBCP0CG48 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.75□□□□□ -0.21
UBCP0CG48 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
UBCP0CG48 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
UBCP0CG48 MROH4P-201ENST00000431302 1578 ntBASIC13.75□□□□□ -0.21
UBCP0CG48 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
UBCP0CG48 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
UBCP0CG48 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
UBCP0CG48 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 CICP14-201ENST00000629111 2732 ntBASIC13.75□□□□□ -0.21
UBCP0CG48 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
UBCP0CG48 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.75□□□□□ -0.21
UBCP0CG48 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.75□□□□□ -0.21
UBCP0CG48 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
UBCP0CG48 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.75□□□□□ -0.21
UBCP0CG48 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.75□□□□□ -0.21
UBCP0CG48 RPL5P21-201ENST00000404620 815 ntBASIC13.75□□□□□ -0.21
UBCP0CG48 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.75□□□□□ -0.21
UBCP0CG48 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 ACTG1P14-201ENST00000446382 1122 ntBASIC13.75□□□□□ -0.21
UBCP0CG48 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.75□□□□□ -0.21
UBCP0CG48 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 AC079140.1-201ENST00000508039 487 ntBASIC13.75□□□□□ -0.21
UBCP0CG48 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.75□□□□□ -0.21
UBCP0CG48 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.75□□□□□ -0.21
UBCP0CG48 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBCP0CG48 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms