Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.54■□□□□ 0.24
PAAF1Q9BRP4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.54■□□□□ 0.24
PAAF1Q9BRP4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
PAAF1Q9BRP4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 TUBB1P2-201ENST00000422712 1306 ntBASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 TUBB1P1-201ENST00000503144 1300 ntBASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 AL355994.2-201ENST00000447882 704 ntBASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 TNRC18P3-201ENST00000441896 2691 ntBASIC16.53■□□□□ 0.24
PAAF1Q9BRP4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 AC007787.1-201ENST00000588095 1583 ntBASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PAAF1Q9BRP4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.52■□□□□ 0.23
PAAF1Q9BRP4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.52■□□□□ 0.23
PAAF1Q9BRP4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PAAF1Q9BRP4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.52■□□□□ 0.23
PAAF1Q9BRP4 AL365203.3-201ENST00000609742 2057 ntBASIC16.52■□□□□ 0.23
PAAF1Q9BRP4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.52■□□□□ 0.23
PAAF1Q9BRP4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PAAF1Q9BRP4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 AC105250.1-201ENST00000509378 2057 ntBASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 AC006001.1-201ENST00000325130 474 ntBASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 ACTBP8-201ENST00000403258 1108 ntBASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.51■□□□□ 0.23
PAAF1Q9BRP4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms