Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Gm13736-201ENSMUST00000119272 253 ntBASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.81□□□□□ -0.04
Atf7Q8R0S1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Gm22018-201ENSMUST00000104357 131 ntBASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Gm5370-201ENSMUST00000187187 574 ntBASIC14.8□□□□□ -0.04
Atf7Q8R0S1 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.8□□□□□ -0.04
Atf7Q8R0S1 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Atf7Q8R0S1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Gm12314-201ENSMUST00000118104 538 ntBASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Gm37008-201ENSMUST00000195712 319 ntBASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atf7Q8R0S1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms