Protein–RNA interactions for Protein: Q8C0J2

Atg16l1, Autophagy-related protein 16-1, mousemouse

Predictions only

Length 607 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg16l1Q8C0J2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atg16l1Q8C0J2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atg16l1Q8C0J2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Gm28693-202ENSMUST00000190758 331 ntBASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.51□□□□□ -0.41
Atg16l1Q8C0J2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Gm14760-201ENSMUST00000121831 999 ntBASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Mir8102-201ENSMUST00000184148 139 ntBASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.5□□□□□ -0.41
Atg16l1Q8C0J2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg16l1Q8C0J2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg16l1Q8C0J2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg16l1Q8C0J2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atg16l1Q8C0J2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg16l1Q8C0J2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atg16l1Q8C0J2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.49□□□□□ -0.41
Atg16l1Q8C0J2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg16l1Q8C0J2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Atg16l1Q8C0J2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atg16l1Q8C0J2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atg16l1Q8C0J2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms