Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp54Q8BL06 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp54Q8BL06 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp54Q8BL06 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp54Q8BL06 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp54Q8BL06 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.52■□□□□ 0.4
Usp54Q8BL06 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp54Q8BL06 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp54Q8BL06 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Usp54Q8BL06 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC17.52■□□□□ 0.4
Usp54Q8BL06 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.52■□□□□ 0.4
Usp54Q8BL06 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp54Q8BL06 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp54Q8BL06 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Usp54Q8BL06 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Usp54Q8BL06 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
Usp54Q8BL06 Gm4654-201ENSMUST00000183305 982 ntBASIC17.52■□□□□ 0.39
Usp54Q8BL06 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Usp54Q8BL06 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC17.52■□□□□ 0.39
Usp54Q8BL06 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp54Q8BL06 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.39
Usp54Q8BL06 AC174797.2-202ENSMUST00000225729 568 ntBASIC17.52■□□□□ 0.39
Usp54Q8BL06 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Usp54Q8BL06 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp54Q8BL06 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Gm18198-201ENSMUST00000204986 1551 ntBASIC17.51■□□□□ 0.39
Usp54Q8BL06 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Gm5706-201ENSMUST00000181525 993 ntBASIC17.51■□□□□ 0.39
Usp54Q8BL06 Gm3551-201ENSMUST00000190750 664 ntBASIC17.51■□□□□ 0.39
Usp54Q8BL06 Gm45113-201ENSMUST00000207518 165 ntBASIC17.51■□□□□ 0.39
Usp54Q8BL06 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC17.51■□□□□ 0.39
Usp54Q8BL06 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Grk6-205ENSMUST00000224653 2976 ntBASIC17.51■□□□□ 0.39
Usp54Q8BL06 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Gm6903-201ENSMUST00000160509 1366 ntBASIC17.51■□□□□ 0.39
Usp54Q8BL06 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp54Q8BL06 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Gm27910-201ENSMUST00000185004 107 ntBASIC17.5■□□□□ 0.39
Usp54Q8BL06 Gm42657-201ENSMUST00000201746 211 ntBASIC17.5■□□□□ 0.39
Usp54Q8BL06 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Usp54Q8BL06 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 AC241621.2-201ENSMUST00000223991 2151 ntBASIC17.5■□□□□ 0.39
Usp54Q8BL06 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Gm13384-201ENSMUST00000117166 1344 ntBASIC17.5■□□□□ 0.39
Usp54Q8BL06 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp54Q8BL06 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Gm1848-201ENSMUST00000120711 789 ntBASIC17.49■□□□□ 0.39
Usp54Q8BL06 Gm8737-201ENSMUST00000122208 642 ntBASIC17.49■□□□□ 0.39
Usp54Q8BL06 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Gm3028-201ENSMUST00000213805 1119 ntBASIC17.49■□□□□ 0.39
Usp54Q8BL06 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp54Q8BL06 AC165260.2-203ENSMUST00000224237 336 ntBASIC17.49■□□□□ 0.39
Usp54Q8BL06 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms