Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim63Q38HM4 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.28□□□□□ -0.76
Trim63Q38HM4 AC121577.1-201ENSMUST00000227302 707 ntBASIC10.28□□□□□ -0.76
Trim63Q38HM4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC10.28□□□□□ -0.76
Trim63Q38HM4 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.28□□□□□ -0.76
Trim63Q38HM4 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Gm43143-201ENSMUST00000196083 2023 ntBASIC10.28□□□□□ -0.76
Trim63Q38HM4 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.28□□□□□ -0.76
Trim63Q38HM4 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trim63Q38HM4 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trim63Q38HM4 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC10.27□□□□□ -0.76
Trim63Q38HM4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trim63Q38HM4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trim63Q38HM4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trim63Q38HM4 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trim63Q38HM4 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trim63Q38HM4 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Trim63Q38HM4 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.27□□□□□ -0.76
Trim63Q38HM4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.27□□□□□ -0.76
Trim63Q38HM4 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC10.27□□□□□ -0.76
Trim63Q38HM4 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.27□□□□□ -0.77
Trim63Q38HM4 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.27□□□□□ -0.77
Trim63Q38HM4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim63Q38HM4 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms