Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 AC007969.1-201ENST00000433675 447 ntBASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 AC092850.2-201ENST00000623821 2697 ntBASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 TNRC18P3-201ENST00000441896 2691 ntBASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SHROOM1Q2M3G4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 AHCYP2-201ENST00000430630 1300 ntBASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 EIF3FP3-201ENST00000434851 1086 ntBASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 RNA5SP486-201ENST00000515961 83 ntBASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 AC005695.3-201ENST00000614522 232 ntBASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 PRSS30P-206ENST00000641773 873 ntBASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHROOM1Q2M3G4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.04■□□□□ 0.48
SHROOM1Q2M3G4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms