Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.38□□□□□ -0.59
Vbp1P61759 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vbp1P61759 Shd-206ENSMUST00000225145 998 ntBASIC11.38□□□□□ -0.59
Vbp1P61759 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.38□□□□□ -0.59
Vbp1P61759 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vbp1P61759 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vbp1P61759 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vbp1P61759 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.38□□□□□ -0.59
Vbp1P61759 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vbp1P61759 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vbp1P61759 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vbp1P61759 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vbp1P61759 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vbp1P61759 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vbp1P61759 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vbp1P61759 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Vbp1P61759 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Vbp1P61759 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vbp1P61759 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Vbp1P61759 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Vbp1P61759 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Vbp1P61759 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.37□□□□□ -0.59
Vbp1P61759 Gm6447-201ENSMUST00000118905 835 ntBASIC11.37□□□□□ -0.59
Vbp1P61759 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Vbp1P61759 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
Vbp1P61759 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Vbp1P61759 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.37□□□□□ -0.59
Vbp1P61759 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.37□□□□□ -0.59
Vbp1P61759 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Gm5161-201ENSMUST00000075243 853 ntBASIC11.37□□□□□ -0.59
Vbp1P61759 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Vbp1P61759 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Vbp1P61759 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vbp1P61759 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Vbp1P61759 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.36□□□□□ -0.59
Vbp1P61759 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Vbp1P61759 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Vbp1P61759 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Vbp1P61759 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Vbp1P61759 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Vbp1P61759 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Vbp1P61759 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.36□□□□□ -0.59
Vbp1P61759 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.36□□□□□ -0.59
Vbp1P61759 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.36□□□□□ -0.59
Vbp1P61759 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Vbp1P61759 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.36□□□□□ -0.59
Vbp1P61759 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Vbp1P61759 Gm18889-201ENSMUST00000174284 929 ntBASIC11.36□□□□□ -0.59
Vbp1P61759 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.36□□□□□ -0.59
Vbp1P61759 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.36□□□□□ -0.59
Vbp1P61759 Gm46209-201ENSMUST00000217912 553 ntBASIC11.36□□□□□ -0.59
Vbp1P61759 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Vbp1P61759 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Vbp1P61759 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.36□□□□□ -0.59
Vbp1P61759 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.36□□□□□ -0.59
Vbp1P61759 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.36□□□□□ -0.59
Vbp1P61759 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.36□□□□□ -0.59
Vbp1P61759 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.36□□□□□ -0.59
Vbp1P61759 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vbp1P61759 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Vbp1P61759 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Vbp1P61759 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.35□□□□□ -0.59
Vbp1P61759 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 131.7 ms