Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.41□□□□□ -0.58
Gm3543D3Z235 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.41□□□□□ -0.58
Gm3543D3Z235 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.41□□□□□ -0.58
Gm3543D3Z235 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Gm3543D3Z235 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Gm18584-201ENSMUST00000203098 964 ntBASIC11.41□□□□□ -0.58
Gm3543D3Z235 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Olfr582-201ENSMUST00000098212 960 ntBASIC11.41□□□□□ -0.58
Gm3543D3Z235 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.41□□□□□ -0.58
Gm3543D3Z235 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Gm11591-201ENSMUST00000120063 702 ntBASIC11.4□□□□□ -0.58
Gm3543D3Z235 Gm12363-201ENSMUST00000122250 668 ntBASIC11.4□□□□□ -0.58
Gm3543D3Z235 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Gm18935-201ENSMUST00000212692 664 ntBASIC11.4□□□□□ -0.58
Gm3543D3Z235 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.4□□□□□ -0.58
Gm3543D3Z235 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Gm9823-201ENSMUST00000051212 327 ntBASIC11.4□□□□□ -0.58
Gm3543D3Z235 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.4□□□□□ -0.58
Gm3543D3Z235 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.4□□□□□ -0.58
Gm3543D3Z235 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3543D3Z235 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm3543D3Z235 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm3543D3Z235 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Gm3543D3Z235 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Gm3543D3Z235 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm3543D3Z235 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.39□□□□□ -0.59
Gm3543D3Z235 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3543D3Z235 Mir1247-201ENSMUST00000116706 82 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms