Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 KRT18P34-201ENST00000488218 1270 ntBASIC13.64□□□□□ -0.23
CCDC107Q8WV48 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 MIR3909-201ENST00000579518 119 ntBASIC13.64□□□□□ -0.23
CCDC107Q8WV48 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.64□□□□□ -0.23
CCDC107Q8WV48 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCDC107Q8WV48 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 AC007686.3-201ENST00000619017 3487 ntBASIC13.63□□□□□ -0.23
CCDC107Q8WV48 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 AC064836.3-201ENST00000607928 673 ntBASIC13.63□□□□□ -0.23
CCDC107Q8WV48 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 AGAP7P-201ENST00000582299 2062 ntBASIC13.63□□□□□ -0.23
CCDC107Q8WV48 AGAP14-201ENST00000624701 2060 ntBASIC13.63□□□□□ -0.23
CCDC107Q8WV48 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC107Q8WV48 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 AC011477.6-201ENST00000604980 1927 ntBASIC13.62□□□□□ -0.23
CCDC107Q8WV48 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 C18orf15-201ENST00000623680 2534 ntBASIC13.62□□□□□ -0.23
CCDC107Q8WV48 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.62□□□□□ -0.23
CCDC107Q8WV48 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms