Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc5Q8CG46 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc5Q8CG46 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Gm6244-201ENSMUST00000178732 841 ntBASIC15.52■□□□□ 0.08
Smc5Q8CG46 Gm8652-201ENSMUST00000181363 964 ntBASIC15.52■□□□□ 0.08
Smc5Q8CG46 Gm27243-201ENSMUST00000183964 521 ntBASIC15.52■□□□□ 0.08
Smc5Q8CG46 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Gm44882-201ENSMUST00000205702 802 ntBASIC15.52■□□□□ 0.08
Smc5Q8CG46 Gm9908-201ENSMUST00000211534 448 ntBASIC15.52■□□□□ 0.08
Smc5Q8CG46 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Smc5Q8CG46 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc5Q8CG46 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Smc5Q8CG46 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc5Q8CG46 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc5Q8CG46 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smc5Q8CG46 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc5Q8CG46 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smc5Q8CG46 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Smc5Q8CG46 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.51■□□□□ 0.07
Smc5Q8CG46 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.51■□□□□ 0.07
Smc5Q8CG46 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Gm12091-201ENSMUST00000146791 830 ntBASIC15.51■□□□□ 0.07
Smc5Q8CG46 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Gm23984-201ENSMUST00000157139 203 ntBASIC15.51■□□□□ 0.07
Smc5Q8CG46 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Auts2-212ENSMUST00000178555 309 ntBASIC15.51■□□□□ 0.07
Smc5Q8CG46 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.51■□□□□ 0.07
Smc5Q8CG46 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smc5Q8CG46 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.5■□□□□ 0.07
Smc5Q8CG46 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Gm11597-201ENSMUST00000121423 964 ntBASIC15.5■□□□□ 0.07
Smc5Q8CG46 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Gm4271-201ENSMUST00000174444 973 ntBASIC15.5■□□□□ 0.07
Smc5Q8CG46 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc5Q8CG46 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Gm19692-201ENSMUST00000203856 2084 ntBASIC15.5■□□□□ 0.07
Smc5Q8CG46 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC15.5■□□□□ 0.07
Smc5Q8CG46 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smc5Q8CG46 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Smc5Q8CG46 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smc5Q8CG46 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc5Q8CG46 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc5Q8CG46 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smc5Q8CG46 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smc5Q8CG46 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC15.49■□□□□ 0.07
Smc5Q8CG46 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Smc5Q8CG46 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms