Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Gm5523-201ENSMUST00000180415 997 ntBASIC15.44■□□□□ 0.06
Trim52Q8CDV4 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Gm7207-201ENSMUST00000211575 1067 ntBASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Spcs1-203ENSMUST00000226374 592 ntBASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim52Q8CDV4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim52Q8CDV4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Gm13035-201ENSMUST00000117496 342 ntBASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Gm7722-201ENSMUST00000120646 741 ntBASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Gm22334-201ENSMUST00000158070 133 ntBASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms