Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 WASH3P-207ENST00000560956 1394 ntBASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 FO538757.1-201ENST00000623083 1397 ntBASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LRRTM1Q86UE6 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 AC018845.2-201ENST00000568326 409 ntBASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 AP002472.1-201ENST00000577490 586 ntBASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 AC099522.2-201ENST00000607001 744 ntBASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 AL691432.3-201ENST00000621860 400 ntBASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 ACE3P-201ENST00000423435 1973 ntBASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms