Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Ccne1Q61457 AC154276.3-201ENSMUST00000227643 998 ntBASIC16.31■□□□□ 0.2
Ccne1Q61457 Gm10371-202ENSMUST00000228010 1081 ntBASIC16.31■□□□□ 0.2
Ccne1Q61457 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccne1Q61457 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ccne1Q61457 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccne1Q61457 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Ccne1Q61457 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ccne1Q61457 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Ccne1Q61457 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccne1Q61457 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccne1Q61457 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccne1Q61457 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm12616-201ENSMUST00000118594 382 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccne1Q61457 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccne1Q61457 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm12624-201ENSMUST00000177615 382 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm12621-201ENSMUST00000177760 382 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm12615-201ENSMUST00000177970 382 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm12622-201ENSMUST00000177975 382 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm12627-201ENSMUST00000178412 382 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm12625-201ENSMUST00000179122 382 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm12614-201ENSMUST00000179586 382 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm12613-201ENSMUST00000180323 382 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm43962-201ENSMUST00000203898 190 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccne1Q61457 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ccne1Q61457 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ccne1Q61457 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Ccne1Q61457 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ccne1Q61457 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC16.3■□□□□ 0.2
Ccne1Q61457 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ccne1Q61457 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccne1Q61457 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Ccne1Q61457 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ccne1Q61457 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Ccne1Q61457 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ccne1Q61457 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.29■□□□□ 0.2
Ccne1Q61457 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.29■□□□□ 0.2
Ccne1Q61457 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccne1Q61457 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Ccne1Q61457 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC16.29■□□□□ 0.2
Ccne1Q61457 Gm13045-201ENSMUST00000119019 712 ntBASIC16.29■□□□□ 0.2
Ccne1Q61457 Gm19353-201ENSMUST00000184561 445 ntBASIC16.29■□□□□ 0.2
Ccne1Q61457 Gm18393-201ENSMUST00000208349 1131 ntBASIC16.29■□□□□ 0.2
Ccne1Q61457 Gm7207-201ENSMUST00000211575 1067 ntBASIC16.29■□□□□ 0.2
Ccne1Q61457 Gm45770-201ENSMUST00000212105 616 ntBASIC16.29■□□□□ 0.2
Ccne1Q61457 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.29■□□□□ 0.2
Ccne1Q61457 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccne1Q61457 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccne1Q61457 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms