Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.93□□□□□ -0.5
Nkx3-2P97503 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx3-2P97503 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Matn2-203ENSMUST00000226766 3252 ntBASIC11.92□□□□□ -0.5
Nkx3-2P97503 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Gm23363-201ENSMUST00000175024 79 ntBASIC11.92□□□□□ -0.5
Nkx3-2P97503 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.92□□□□□ -0.5
Nkx3-2P97503 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.92□□□□□ -0.5
Nkx3-2P97503 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.92□□□□□ -0.5
Nkx3-2P97503 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx3-2P97503 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.91□□□□□ -0.5
Nkx3-2P97503 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gm12502-201ENSMUST00000120197 444 ntBASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gm14726-201ENSMUST00000120623 896 ntBASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gm14381-201ENSMUST00000122105 414 ntBASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gm4857-201ENSMUST00000192718 785 ntBASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gm38092-201ENSMUST00000195600 653 ntBASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.91□□□□□ -0.5
Nkx3-2P97503 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gm6334-201ENSMUST00000207083 228 ntBASIC11.91□□□□□ -0.5
Nkx3-2P97503 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx3-2P97503 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.91□□□□□ -0.5
Nkx3-2P97503 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gm24526-201ENSMUST00000082921 158 ntBASIC11.91□□□□□ -0.5
Nkx3-2P97503 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.91□□□□□ -0.5
Nkx3-2P97503 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx3-2P97503 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms