Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nckap1P28660 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nckap1P28660 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nckap1P28660 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nckap1P28660 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Nckap1P28660 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nckap1P28660 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Nckap1P28660 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.56□□□□□ -0.4
Nckap1P28660 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.56□□□□□ -0.4
Nckap1P28660 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nckap1P28660 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nckap1P28660 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nckap1P28660 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.56□□□□□ -0.4
Nckap1P28660 Gm14277-201ENSMUST00000121195 360 ntBASIC12.56□□□□□ -0.4
Nckap1P28660 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.56□□□□□ -0.4
Nckap1P28660 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.56□□□□□ -0.4
Nckap1P28660 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Mir5132-201ENSMUST00000175166 71 ntBASIC12.56□□□□□ -0.4
Nckap1P28660 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Rps4l-202ENSMUST00000204242 789 ntBASIC12.56□□□□□ -0.4
Nckap1P28660 Gm44651-201ENSMUST00000207343 372 ntBASIC12.56□□□□□ -0.4
Nckap1P28660 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.56□□□□□ -0.4
Nckap1P28660 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.56□□□□□ -0.4
Nckap1P28660 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.56□□□□□ -0.4
Nckap1P28660 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Nckap1P28660 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.56□□□□□ -0.4
Nckap1P28660 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.56□□□□□ -0.4
Nckap1P28660 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.56□□□□□ -0.4
Nckap1P28660 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nckap1P28660 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Nckap1P28660 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.56□□□□□ -0.4
Nckap1P28660 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nckap1P28660 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.56□□□□□ -0.4
Nckap1P28660 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nckap1P28660 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nckap1P28660 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.55□□□□□ -0.4
Nckap1P28660 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nckap1P28660 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Gm14999-201ENSMUST00000121039 624 ntBASIC12.55□□□□□ -0.4
Nckap1P28660 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.55□□□□□ -0.4
Nckap1P28660 Gm24990-201ENSMUST00000157406 323 ntBASIC12.55□□□□□ -0.4
Nckap1P28660 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Gm16505-201ENSMUST00000179981 232 ntBASIC12.55□□□□□ -0.4
Nckap1P28660 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Gm2260-201ENSMUST00000184965 657 ntBASIC12.55□□□□□ -0.4
Nckap1P28660 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.55□□□□□ -0.4
Nckap1P28660 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.55□□□□□ -0.4
Nckap1P28660 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.55□□□□□ -0.4
Nckap1P28660 Gm19208-201ENSMUST00000213861 912 ntBASIC12.55□□□□□ -0.4
Nckap1P28660 Gm8712-201ENSMUST00000221090 701 ntBASIC12.55□□□□□ -0.4
Nckap1P28660 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nckap1P28660 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms