Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TnfP06804 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TnfP06804 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.35□□□□□ -0.27
TnfP06804 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TnfP06804 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
TnfP06804 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
TnfP06804 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.34□□□□□ -0.27
TnfP06804 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TnfP06804 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.34□□□□□ -0.27
TnfP06804 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.34□□□□□ -0.27
TnfP06804 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.34□□□□□ -0.27
TnfP06804 Gm44651-201ENSMUST00000207343 372 ntBASIC13.34□□□□□ -0.27
TnfP06804 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TnfP06804 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.34□□□□□ -0.27
TnfP06804 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.34□□□□□ -0.27
TnfP06804 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TnfP06804 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.34□□□□□ -0.27
TnfP06804 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TnfP06804 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
TnfP06804 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TnfP06804 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TnfP06804 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TnfP06804 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.33□□□□□ -0.28
TnfP06804 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TnfP06804 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.33□□□□□ -0.28
TnfP06804 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.33□□□□□ -0.28
TnfP06804 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TnfP06804 Gm14017-201ENSMUST00000121934 386 ntBASIC13.33□□□□□ -0.28
TnfP06804 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.33□□□□□ -0.28
TnfP06804 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.33□□□□□ -0.28
TnfP06804 Gm6963-201ENSMUST00000147879 379 ntBASIC13.33□□□□□ -0.28
TnfP06804 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TnfP06804 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.33□□□□□ -0.28
TnfP06804 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.33□□□□□ -0.28
TnfP06804 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TnfP06804 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
TnfP06804 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.33□□□□□ -0.28
TnfP06804 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.33□□□□□ -0.28
TnfP06804 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.33□□□□□ -0.28
TnfP06804 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.33□□□□□ -0.28
TnfP06804 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.33□□□□□ -0.28
TnfP06804 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TnfP06804 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TnfP06804 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TnfP06804 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TnfP06804 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms