Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
P04214 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
P04214 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
P04214 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.08□□□□□ -0.32
P04214 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.08□□□□□ -0.32
P04214 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
P04214 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.08□□□□□ -0.32
P04214 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.08□□□□□ -0.32
P04214 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.08□□□□□ -0.32
P04214 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
P04214 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.08□□□□□ -0.32
P04214 Gm25072-201ENSMUST00000175233 235 ntBASIC13.08□□□□□ -0.32
P04214 Gm8492-201ENSMUST00000182375 987 ntBASIC13.08□□□□□ -0.32
P04214 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Gm2517-201ENSMUST00000215651 348 ntBASIC13.08□□□□□ -0.32
P04214 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.08□□□□□ -0.32
P04214 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P04214 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.08□□□□□ -0.32
P04214 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04214 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.08□□□□□ -0.32
P04214 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.07□□□□□ -0.32
P04214 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
P04214 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
P04214 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
P04214 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.07□□□□□ -0.32
P04214 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.07□□□□□ -0.32
P04214 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.07□□□□□ -0.32
P04214 Rprl1-201ENSMUST00000158050 327 ntBASIC13.07□□□□□ -0.32
P04214 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Gm28686-201ENSMUST00000187404 609 ntBASIC13.07□□□□□ -0.32
P04214 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.07□□□□□ -0.32
P04214 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.07□□□□□ -0.32
P04214 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.07□□□□□ -0.32
P04214 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.07□□□□□ -0.32
P04214 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.07□□□□□ -0.32
P04214 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.07□□□□□ -0.32
P04214 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
P04214 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
P04214 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
P04214 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04214 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04214 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04214 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04214 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04214 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04214 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
P04214 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04214 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04214 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
P04214 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04214 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.06□□□□□ -0.32
P04214 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.06□□□□□ -0.32
P04214 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms