Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav8-1A0A075B641 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9□□□□□ -0.97
Trav8-1A0A075B641 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Gm8617-201ENSMUST00000118796 2222 ntBASIC9□□□□□ -0.97
Trav8-1A0A075B641 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Gm45684-201ENSMUST00000210244 1571 ntBASIC9□□□□□ -0.97
Trav8-1A0A075B641 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC9□□□□□ -0.97
Trav8-1A0A075B641 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 AC154621.1-201ENSMUST00000226155 1119 ntBASIC9□□□□□ -0.97
Trav8-1A0A075B641 AC131710.1-201ENSMUST00000228336 990 ntBASIC9□□□□□ -0.97
Trav8-1A0A075B641 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav8-1A0A075B641 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Gm5566-201ENSMUST00000116118 459 ntBASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Gm13015-201ENSMUST00000118674 204 ntBASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Gm13385-201ENSMUST00000121089 220 ntBASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC8.99□□□□□ -0.97
Trav8-1A0A075B641 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms