Protein–RNA interactions for Protein: Q8K389

Cdk5rap2, CDK5 regulatory subunit-associated protein 2, mousemouse

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap2Q8K389 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap2Q8K389 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap2Q8K389 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap2Q8K389 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap2Q8K389 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap2Q8K389 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap2Q8K389 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Gm13910-201ENSMUST00000121752 1428 ntBASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Ighv1-48-201ENSMUST00000191795 294 ntBASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Gm9279-201ENSMUST00000223175 1606 ntBASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap2Q8K389 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 n-R5s64-201ENSMUST00000102019 119 ntBASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Gm9192-201ENSMUST00000183221 985 ntBASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Gm43520-201ENSMUST00000197996 164 ntBASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Gm19287-201ENSMUST00000203190 358 ntBASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Gm17831-201ENSMUST00000205579 900 ntBASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Gm5537-201ENSMUST00000091117 1252 ntBASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Gm9387-201ENSMUST00000098624 1320 ntBASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Cdk5rap2Q8K389 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap2Q8K389 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap2Q8K389 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Cdk5rap2Q8K389 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap2Q8K389 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Cdk5rap2Q8K389 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap2Q8K389 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.77■□□□□ 0.27
Cdk5rap2Q8K389 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cdk5rap2Q8K389 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cdk5rap2Q8K389 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap2Q8K389 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap2Q8K389 Gm38385-201ENSMUST00000194454 2351 ntBASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Gm12029-201ENSMUST00000120073 832 ntBASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Gm11246-201ENSMUST00000120880 345 ntBASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Gm9136-201ENSMUST00000193368 454 ntBASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Gm44270-201ENSMUST00000203084 1234 ntBASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 AC132901.1-201ENSMUST00000224345 508 ntBASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap2Q8K389 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms