Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm7666-201ENSMUST00000146631 819 ntBASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Mir7686-201ENSMUST00000200604 57 ntBASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Col6a6Q8C6K9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Gm807-202ENSMUST00000224929 408 ntBASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a6Q8C6K9 Gm14644-201ENSMUST00000116671 647 ntBASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Gm12266-201ENSMUST00000120311 962 ntBASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Gm15432-201ENSMUST00000121106 195 ntBASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Gm16296-201ENSMUST00000159905 325 ntBASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Gm5455-201ENSMUST00000058710 715 ntBASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Col6a6Q8C6K9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Col6a6Q8C6K9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms