Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SftpbP50405 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.88□□□□□ -0.35
SftpbP50405 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.88□□□□□ -0.35
SftpbP50405 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
SftpbP50405 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.88□□□□□ -0.35
SftpbP50405 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Gm23984-201ENSMUST00000157139 203 ntBASIC12.88□□□□□ -0.35
SftpbP50405 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.88□□□□□ -0.35
SftpbP50405 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.88□□□□□ -0.35
SftpbP50405 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SftpbP50405 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.88□□□□□ -0.35
SftpbP50405 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SftpbP50405 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SftpbP50405 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
SftpbP50405 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.88□□□□□ -0.35
SftpbP50405 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.88□□□□□ -0.35
SftpbP50405 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.88□□□□□ -0.35
SftpbP50405 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.88□□□□□ -0.35
SftpbP50405 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.88□□□□□ -0.35
SftpbP50405 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SftpbP50405 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SftpbP50405 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.87□□□□□ -0.35
SftpbP50405 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.87□□□□□ -0.35
SftpbP50405 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
SftpbP50405 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Gm16479-201ENSMUST00000121706 932 ntBASIC12.87□□□□□ -0.35
SftpbP50405 Gm37922-201ENSMUST00000195596 455 ntBASIC12.87□□□□□ -0.35
SftpbP50405 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.87□□□□□ -0.35
SftpbP50405 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.87□□□□□ -0.35
SftpbP50405 Gm44124-201ENSMUST00000204159 472 ntBASIC12.87□□□□□ -0.35
SftpbP50405 Gm7287-201ENSMUST00000205267 602 ntBASIC12.87□□□□□ -0.35
SftpbP50405 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.87□□□□□ -0.35
SftpbP50405 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SftpbP50405 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SftpbP50405 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SftpbP50405 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SftpbP50405 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SftpbP50405 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.87□□□□□ -0.35
SftpbP50405 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SftpbP50405 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SftpbP50405 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SftpbP50405 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SftpbP50405 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SftpbP50405 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SftpbP50405 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.86□□□□□ -0.35
SftpbP50405 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SftpbP50405 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SftpbP50405 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SftpbP50405 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms