Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hoxa4P06798 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxa4P06798 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Hoxa4P06798 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hoxa4P06798 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hoxa4P06798 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hoxa4P06798 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Hoxa4P06798 Gm24255-201ENSMUST00000104481 128 ntBASIC12.42□□□□□ -0.42
Hoxa4P06798 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Hoxa4P06798 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.42□□□□□ -0.42
Hoxa4P06798 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.42□□□□□ -0.42
Hoxa4P06798 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Hoxa4P06798 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hoxa4P06798 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxa4P06798 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa4P06798 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hoxa4P06798 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.41□□□□□ -0.42
Hoxa4P06798 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxa4P06798 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Hoxa4P06798 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.41□□□□□ -0.42
Hoxa4P06798 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Hoxa4P06798 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.41□□□□□ -0.42
Hoxa4P06798 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.41□□□□□ -0.42
Hoxa4P06798 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Gm43822-201ENSMUST00000200285 476 ntBASIC12.41□□□□□ -0.42
Hoxa4P06798 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.41□□□□□ -0.42
Hoxa4P06798 Gm7783-201ENSMUST00000204795 781 ntBASIC12.41□□□□□ -0.42
Hoxa4P06798 Gm6334-201ENSMUST00000207083 228 ntBASIC12.41□□□□□ -0.42
Hoxa4P06798 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxa4P06798 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa4P06798 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.4□□□□□ -0.42
Hoxa4P06798 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hoxa4P06798 Gm28882-201ENSMUST00000185504 314 ntBASIC12.4□□□□□ -0.42
Hoxa4P06798 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxa4P06798 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxa4P06798 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Gm44958-201ENSMUST00000203734 736 ntBASIC12.4□□□□□ -0.42
Hoxa4P06798 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Hoxa4P06798 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Hoxa4P06798 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa4P06798 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms