Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm18893-201ENSMUST00000198416 943 ntBASIC16.05■□□□□ 0.16
Ubr1O70481 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Gm44270-201ENSMUST00000203084 1234 ntBASIC16.05■□□□□ 0.16
Ubr1O70481 Gm6867-201ENSMUST00000219165 425 ntBASIC16.05■□□□□ 0.16
Ubr1O70481 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC16.05■□□□□ 0.16
Ubr1O70481 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ubr1O70481 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ubr1O70481 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Gm13910-201ENSMUST00000121752 1428 ntBASIC16.04■□□□□ 0.16
Ubr1O70481 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC16.04■□□□□ 0.16
Ubr1O70481 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.04■□□□□ 0.16
Ubr1O70481 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 CT009713.8-202ENSMUST00000224732 385 ntBASIC16.04■□□□□ 0.16
Ubr1O70481 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC16.04■□□□□ 0.16
Ubr1O70481 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.04■□□□□ 0.16
Ubr1O70481 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ubr1O70481 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Gm13888-201ENSMUST00000119148 422 ntBASIC16.03■□□□□ 0.16
Ubr1O70481 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Ubr1O70481 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC16.03■□□□□ 0.16
Ubr1O70481 CT485607.1-201ENSMUST00000216100 85 ntBASIC16.03■□□□□ 0.16
Ubr1O70481 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ubr1O70481 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ubr1O70481 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ubr1O70481 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Ubr1O70481 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.03■□□□□ 0.16
Ubr1O70481 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC16.03■□□□□ 0.16
Ubr1O70481 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Ubr1O70481 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC16.03■□□□□ 0.16
Ubr1O70481 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ubr1O70481 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ubr1O70481 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC16.03■□□□□ 0.16
Ubr1O70481 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC16.03■□□□□ 0.16
Ubr1O70481 Gm5537-201ENSMUST00000091117 1252 ntBASIC16.03■□□□□ 0.16
Ubr1O70481 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ubr1O70481 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ubr1O70481 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ubr1O70481 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ubr1O70481 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ubr1O70481 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.02■□□□□ 0.16
Ubr1O70481 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ubr1O70481 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ubr1O70481 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ubr1O70481 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ubr1O70481 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ubr1O70481 Gm9129-201ENSMUST00000218173 1689 ntBASIC16.02■□□□□ 0.16
Ubr1O70481 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ubr1O70481 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ubr1O70481 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ubr1O70481 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ubr1O70481 Gm23912-201ENSMUST00000104687 87 ntBASIC16.02■□□□□ 0.15
Ubr1O70481 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC16.02■□□□□ 0.15
Ubr1O70481 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ubr1O70481 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ubr1O70481 Gm23045-201ENSMUST00000175041 96 ntBASIC16.02■□□□□ 0.15
Ubr1O70481 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC16.02■□□□□ 0.15
Ubr1O70481 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC16.02■□□□□ 0.15
Ubr1O70481 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC16.02■□□□□ 0.15
Ubr1O70481 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ubr1O70481 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ubr1O70481 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ubr1O70481 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ubr1O70481 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ubr1O70481 Gm28323-201ENSMUST00000186817 2499 ntBASIC16.02■□□□□ 0.15
Ubr1O70481 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ubr1O70481 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ubr1O70481 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ubr1O70481 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms