Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX39AO00148 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX39AO00148 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.61■□□□□ 0.41
DDX39AO00148 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX39AO00148 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX39AO00148 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
DDX39AO00148 AP005117.1-202ENST00000581724 1908 ntBASIC17.61■□□□□ 0.41
DDX39AO00148 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
DDX39AO00148 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX39AO00148 TMEM14DP-201ENST00000422205 345 ntBASIC17.61■□□□□ 0.41
DDX39AO00148 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX39AO00148 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.61■□□□□ 0.41
DDX39AO00148 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
DDX39AO00148 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
DDX39AO00148 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
DDX39AO00148 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.61■□□□□ 0.41
DDX39AO00148 BRI3BPP1-201ENST00000594224 787 ntBASIC17.61■□□□□ 0.41
DDX39AO00148 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX39AO00148 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.61■□□□□ 0.41
DDX39AO00148 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX39AO00148 AC009090.5-201ENST00000624886 2285 ntBASIC17.61■□□□□ 0.41
DDX39AO00148 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
DDX39AO00148 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
DDX39AO00148 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.61■□□□□ 0.41
DDX39AO00148 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 AC132872.4-202ENST00000622924 2756 ntBASIC17.61■□□□□ 0.41
DDX39AO00148 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX39AO00148 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX39AO00148 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX39AO00148 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX39AO00148 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
DDX39AO00148 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX39AO00148 TNRC18P3-201ENST00000441896 2691 ntBASIC17.6■□□□□ 0.41
DDX39AO00148 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
DDX39AO00148 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
DDX39AO00148 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.6■□□□□ 0.41
DDX39AO00148 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX39AO00148 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX39AO00148 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX39AO00148 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.6■□□□□ 0.41
DDX39AO00148 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX39AO00148 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.6■□□□□ 0.41
DDX39AO00148 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.6■□□□□ 0.41
DDX39AO00148 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX39AO00148 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX39AO00148 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
DDX39AO00148 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
DDX39AO00148 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX39AO00148 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX39AO00148 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
DDX39AO00148 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX39AO00148 AC092850.2-201ENST00000623821 2697 ntBASIC17.59■□□□□ 0.41
DDX39AO00148 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX39AO00148 INTS4P2-202ENST00000614726 2019 ntBASIC17.59■□□□□ 0.41
DDX39AO00148 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.59■□□□□ 0.41
DDX39AO00148 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
DDX39AO00148 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
DDX39AO00148 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX39AO00148 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms