Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AC012441.1-201ENST00000446669 685 ntBASIC18.24■□□□□ 0.51
SH2D4AQ9H788 CTBP2P5-201ENST00000454986 1264 ntBASIC18.24■□□□□ 0.51
SH2D4AQ9H788 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 MIR4313-201ENST00000580760 101 ntBASIC18.24■□□□□ 0.51
SH2D4AQ9H788 AC107373.2-201ENST00000607735 490 ntBASIC18.24■□□□□ 0.51
SH2D4AQ9H788 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 AC007950.2-201ENST00000615045 2347 ntBASIC18.24■□□□□ 0.51
SH2D4AQ9H788 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 PDIA3P1-201ENST00000471856 1510 ntBASIC18.23■□□□□ 0.51
SH2D4AQ9H788 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 ACKR1-201ENST00000368121 1240 ntBASIC18.23■□□□□ 0.51
SH2D4AQ9H788 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 AC134312.5-201ENST00000568031 1313 ntBASIC18.23■□□□□ 0.51
SH2D4AQ9H788 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH2D4AQ9H788 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 ANKRD19P-201ENST00000338192 862 ntBASIC18.22■□□□□ 0.51
SH2D4AQ9H788 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 MIR4259-201ENST00000584466 101 ntBASIC18.22■□□□□ 0.51
SH2D4AQ9H788 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SH2D4AQ9H788 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SH2D4AQ9H788 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms