Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim54Q9ERP3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Gm13665-201ENSMUST00000120830 528 ntBASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim54Q9ERP3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Gm14028-201ENSMUST00000117434 479 ntBASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Gm26361-201ENSMUST00000158868 186 ntBASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Gm3786-201ENSMUST00000202659 378 ntBASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim54Q9ERP3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms