Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Mzt1-203ENSMUST00000227948 952 ntBASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RTRAFQ9CQE8 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Gm9630-201ENSMUST00000178304 885 ntBASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Gm29541-201ENSMUST00000191351 678 ntBASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RTRAFQ9CQE8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms