Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 AC004945.1-201ENST00000416738 983 ntBASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 IGHJ2P-201ENST00000454480 60 ntBASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 AC091804.1-201ENST00000486888 567 ntBASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 KC6-205ENST00000599934 556 ntTSL 4 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC20.36■□□□□ 0.85
RAPGEF4Q8WZA2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 SCARNA20.5-201ENST00000516991 142 ntBASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.35■□□□□ 0.85
RAPGEF4Q8WZA2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 AL662844.4-201ENST00000606367 2838 ntBASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 PCDHA12-202ENST00000613593 2588 ntBASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 AL139094.1-201ENST00000405549 1188 ntBASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 RHOQP1-201ENST00000555758 579 ntBASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAPGEF4Q8WZA2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 204.6 ms