Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC16.65■□□□□ 0.26
Cps1Q8C196 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm25880-201ENSMUST00000104331 132 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm23912-201ENSMUST00000104687 87 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm13668-201ENSMUST00000119237 1001 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm1848-201ENSMUST00000120711 789 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm13937-201ENSMUST00000121000 988 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm42518-201ENSMUST00000196277 938 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm18893-201ENSMUST00000198416 943 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm42657-201ENSMUST00000201746 211 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm6430-201ENSMUST00000054664 1248 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Cps1Q8C196 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Cps1Q8C196 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cps1Q8C196 Gm12419-201ENSMUST00000116649 636 ntBASIC16.64■□□□□ 0.25
Cps1Q8C196 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC16.64■□□□□ 0.25
Cps1Q8C196 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC16.64■□□□□ 0.25
Cps1Q8C196 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC16.64■□□□□ 0.25
Cps1Q8C196 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cps1Q8C196 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cps1Q8C196 Gm27910-201ENSMUST00000185004 107 ntBASIC16.64■□□□□ 0.25
Cps1Q8C196 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cps1Q8C196 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC16.64■□□□□ 0.25
Cps1Q8C196 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC16.64■□□□□ 0.25
Cps1Q8C196 AC124433.1-201ENSMUST00000224483 1063 ntBASIC16.64■□□□□ 0.25
Cps1Q8C196 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cps1Q8C196 Gm5879-201ENSMUST00000089501 1209 ntBASIC16.64■□□□□ 0.25
Cps1Q8C196 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cps1Q8C196 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cps1Q8C196 CT009489.1-201ENSMUST00000227740 1893 ntBASIC16.64■□□□□ 0.25
Cps1Q8C196 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cps1Q8C196 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC16.63■□□□□ 0.25
Cps1Q8C196 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cps1Q8C196 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Cps1Q8C196 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Cps1Q8C196 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC16.63■□□□□ 0.25
Cps1Q8C196 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC16.63■□□□□ 0.25
Cps1Q8C196 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC16.63■□□□□ 0.25
Cps1Q8C196 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cps1Q8C196 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC16.63■□□□□ 0.25
Cps1Q8C196 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC16.63■□□□□ 0.25
Cps1Q8C196 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cps1Q8C196 Zkscan3-207ENSMUST00000223831 2101 ntBASIC16.63■□□□□ 0.25
Cps1Q8C196 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC16.63■□□□□ 0.25
Cps1Q8C196 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cps1Q8C196 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.62■□□□□ 0.25
Cps1Q8C196 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cps1Q8C196 AC126262.1-201ENSMUST00000221802 1904 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms