Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Scn9aQ62205 Mir483-201ENSMUST00000093631 73 ntBASIC14.58□□□□□ -0.07
Scn9aQ62205 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Scn9aQ62205 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Scn9aQ62205 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.58□□□□□ -0.08
Scn9aQ62205 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Scn9aQ62205 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.58□□□□□ -0.08
Scn9aQ62205 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.58□□□□□ -0.08
Scn9aQ62205 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14.58□□□□□ -0.08
Scn9aQ62205 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC14.58□□□□□ -0.08
Scn9aQ62205 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.58□□□□□ -0.08
Scn9aQ62205 Gm15744-201ENSMUST00000161734 213 ntBASIC14.58□□□□□ -0.08
Scn9aQ62205 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.58□□□□□ -0.08
Scn9aQ62205 Gm43692-201ENSMUST00000198236 1062 ntBASIC14.58□□□□□ -0.08
Scn9aQ62205 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Scn9aQ62205 Gm45575-201ENSMUST00000210283 548 ntBASIC14.58□□□□□ -0.08
Scn9aQ62205 Gm19009-201ENSMUST00000223072 823 ntBASIC14.58□□□□□ -0.08
Scn9aQ62205 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.58□□□□□ -0.08
Scn9aQ62205 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn9aQ62205 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.58□□□□□ -0.08
Scn9aQ62205 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn9aQ62205 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scn9aQ62205 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn9aQ62205 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn9aQ62205 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Scn9aQ62205 Gm7722-201ENSMUST00000120646 741 ntBASIC14.57□□□□□ -0.08
Scn9aQ62205 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.57□□□□□ -0.08
Scn9aQ62205 Gm5705-201ENSMUST00000066241 711 ntBASIC14.57□□□□□ -0.08
Scn9aQ62205 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn9aQ62205 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Scn9aQ62205 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scn9aQ62205 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn9aQ62205 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn9aQ62205 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn9aQ62205 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn9aQ62205 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Scn9aQ62205 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn9aQ62205 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn9aQ62205 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn9aQ62205 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Scn9aQ62205 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Gm11836-201ENSMUST00000121022 441 ntBASIC14.56□□□□□ -0.08
Scn9aQ62205 Gm11980-201ENSMUST00000121445 986 ntBASIC14.56□□□□□ -0.08
Scn9aQ62205 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scn9aQ62205 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scn9aQ62205 Gm9111-201ENSMUST00000219394 709 ntBASIC14.56□□□□□ -0.08
Scn9aQ62205 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Scn9aQ62205 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Scn9aQ62205 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Scn9aQ62205 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Gm7541-201ENSMUST00000118361 535 ntBASIC14.56□□□□□ -0.08
Scn9aQ62205 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC14.56□□□□□ -0.08
Scn9aQ62205 Gm12969-201ENSMUST00000120199 1004 ntBASIC14.56□□□□□ -0.08
Scn9aQ62205 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.56□□□□□ -0.08
Scn9aQ62205 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.56□□□□□ -0.08
Scn9aQ62205 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC14.56□□□□□ -0.08
Scn9aQ62205 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.56□□□□□ -0.08
Scn9aQ62205 Gm5100-201ENSMUST00000195631 589 ntBASIC14.56□□□□□ -0.08
Scn9aQ62205 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.56□□□□□ -0.08
Scn9aQ62205 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn9aQ62205 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms