Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cks1brtQ3UNC9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Gm18737-201ENSMUST00000173594 937 ntBASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Gm17807-201ENSMUST00000186869 298 ntBASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Gm45453-201ENSMUST00000211758 853 ntBASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 AC131187.1-201ENSMUST00000224567 809 ntBASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Gm42934-201ENSMUST00000196920 1345 ntBASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cks1brtQ3UNC9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 AC153937.1-201ENSMUST00000218734 412 ntBASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Rps4l-201ENSMUST00000071745 943 ntBASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cks1brtQ3UNC9 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms