Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rab42Q0PD08 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.21□□□□□ -0.61
Rab42Q0PD08 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rab42Q0PD08 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Rab42Q0PD08 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Rab42Q0PD08 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.21□□□□□ -0.61
Rab42Q0PD08 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.21□□□□□ -0.61
Rab42Q0PD08 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.21□□□□□ -0.61
Rab42Q0PD08 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rab42Q0PD08 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Rab42Q0PD08 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.21□□□□□ -0.61
Rab42Q0PD08 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rab42Q0PD08 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rab42Q0PD08 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rab42Q0PD08 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Rab42Q0PD08 Gm28760-201ENSMUST00000185995 736 ntBASIC11.21□□□□□ -0.61
Rab42Q0PD08 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rab42Q0PD08 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.21□□□□□ -0.61
Rab42Q0PD08 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.21□□□□□ -0.61
Rab42Q0PD08 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.21□□□□□ -0.61
Rab42Q0PD08 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rab42Q0PD08 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rab42Q0PD08 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.21□□□□□ -0.62
Rab42Q0PD08 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rab42Q0PD08 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rab42Q0PD08 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rab42Q0PD08 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.21□□□□□ -0.62
Rab42Q0PD08 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rab42Q0PD08 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.21□□□□□ -0.62
Rab42Q0PD08 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rab42Q0PD08 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rab42Q0PD08 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rab42Q0PD08 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rab42Q0PD08 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rab42Q0PD08 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Rab42Q0PD08 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rab42Q0PD08 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rab42Q0PD08 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.2□□□□□ -0.62
Rab42Q0PD08 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Gm12485-201ENSMUST00000119641 291 ntBASIC11.2□□□□□ -0.62
Rab42Q0PD08 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.2□□□□□ -0.62
Rab42Q0PD08 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Gm43094-201ENSMUST00000196549 921 ntBASIC11.2□□□□□ -0.62
Rab42Q0PD08 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.2□□□□□ -0.62
Rab42Q0PD08 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Gm5161-201ENSMUST00000075243 853 ntBASIC11.2□□□□□ -0.62
Rab42Q0PD08 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rab42Q0PD08 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.2□□□□□ -0.62
Rab42Q0PD08 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rab42Q0PD08 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rab42Q0PD08 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rab42Q0PD08 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rab42Q0PD08 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rab42Q0PD08 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.19□□□□□ -0.62
Rab42Q0PD08 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rab42Q0PD08 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rab42Q0PD08 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rab42Q0PD08 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rab42Q0PD08 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Rab42Q0PD08 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rab42Q0PD08 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rab42Q0PD08 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rab42Q0PD08 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 185.7 ms