Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Cacna1aP97445 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.67□□□□□ -0.54
Cacna1aP97445 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Gm12314-201ENSMUST00000118104 538 ntBASIC11.67□□□□□ -0.54
Cacna1aP97445 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.67□□□□□ -0.54
Cacna1aP97445 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.67□□□□□ -0.54
Cacna1aP97445 Gzmn-202ENSMUST00000225535 989 ntBASIC11.67□□□□□ -0.54
Cacna1aP97445 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.67□□□□□ -0.54
Cacna1aP97445 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cacna1aP97445 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cacna1aP97445 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cacna1aP97445 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.67□□□□□ -0.54
Cacna1aP97445 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.67□□□□□ -0.54
Cacna1aP97445 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cacna1aP97445 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cacna1aP97445 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.67□□□□□ -0.54
Cacna1aP97445 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.67□□□□□ -0.54
Cacna1aP97445 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.67□□□□□ -0.54
Cacna1aP97445 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.67□□□□□ -0.54
Cacna1aP97445 Arhgef33-210ENSMUST00000225548 456 ntBASIC11.67□□□□□ -0.54
Cacna1aP97445 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cacna1aP97445 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Cacna1aP97445 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
Cacna1aP97445 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cacna1aP97445 Gm13035-201ENSMUST00000117496 342 ntBASIC11.66□□□□□ -0.54
Cacna1aP97445 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.66□□□□□ -0.54
Cacna1aP97445 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Gm17812-201ENSMUST00000204935 318 ntBASIC11.66□□□□□ -0.54
Cacna1aP97445 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.66□□□□□ -0.54
Cacna1aP97445 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.66□□□□□ -0.54
Cacna1aP97445 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cacna1aP97445 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cacna1aP97445 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.66□□□□□ -0.54
Cacna1aP97445 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cacna1aP97445 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.65□□□□□ -0.54
Cacna1aP97445 Gm11450-201ENSMUST00000121144 333 ntBASIC11.65□□□□□ -0.54
Cacna1aP97445 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.54
Cacna1aP97445 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 AY036118-201ENSMUST00000200021 923 ntBASIC11.65□□□□□ -0.54
Cacna1aP97445 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.65□□□□□ -0.54
Cacna1aP97445 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cacna1aP97445 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cacna1aP97445 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cacna1aP97445 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms