Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtl1Q7M732 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC22.25■■□□□ 1.15
Rtl1Q7M732 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rtl1Q7M732 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtl1Q7M732 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtl1Q7M732 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Rtl1Q7M732 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rtl1Q7M732 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC22.24■■□□□ 1.15
Rtl1Q7M732 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Gm9555-201ENSMUST00000200908 583 ntBASIC22.24■■□□□ 1.15
Rtl1Q7M732 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC22.24■■□□□ 1.15
Rtl1Q7M732 AC160405.1-201ENSMUST00000218207 1545 ntBASIC22.24■■□□□ 1.15
Rtl1Q7M732 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Rtl1Q7M732 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Gm19208-201ENSMUST00000213861 912 ntBASIC22.23■■□□□ 1.15
Rtl1Q7M732 Olfr1347-205ENSMUST00000220413 964 ntBASIC22.23■■□□□ 1.15
Rtl1Q7M732 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Rtl1Q7M732 H2-Q3-201ENSMUST00000172583 608 ntBASIC22.23■■□□□ 1.15
Rtl1Q7M732 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rtl1Q7M732 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Gm16570-201ENSMUST00000161951 436 ntBASIC22.22■■□□□ 1.15
Rtl1Q7M732 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Gm18393-201ENSMUST00000208349 1131 ntBASIC22.22■■□□□ 1.15
Rtl1Q7M732 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC22.22■■□□□ 1.15
Rtl1Q7M732 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rtl1Q7M732 Gm10710-201ENSMUST00000047876 3971 ntBASIC22.21■■□□□ 1.15
Rtl1Q7M732 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Gm13996-201ENSMUST00000118456 430 ntBASIC22.21■■□□□ 1.15
Rtl1Q7M732 Gm5419-201ENSMUST00000119301 527 ntBASIC22.21■■□□□ 1.15
Rtl1Q7M732 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Gm18730-201ENSMUST00000218038 343 ntBASIC22.21■■□□□ 1.15
Rtl1Q7M732 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rtl1Q7M732 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms