Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.08□□□□□ -0.48
Nr1h4Q60641 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.08□□□□□ -0.48
Nr1h4Q60641 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.08□□□□□ -0.48
Nr1h4Q60641 Gm42612-201ENSMUST00000197986 623 ntBASIC12.08□□□□□ -0.48
Nr1h4Q60641 Gm43170-201ENSMUST00000199827 612 ntBASIC12.08□□□□□ -0.48
Nr1h4Q60641 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.08□□□□□ -0.48
Nr1h4Q60641 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.08□□□□□ -0.48
Nr1h4Q60641 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.07□□□□□ -0.48
Nr1h4Q60641 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.07□□□□□ -0.48
Nr1h4Q60641 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Gm19184-201ENSMUST00000196798 928 ntBASIC12.07□□□□□ -0.48
Nr1h4Q60641 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.07□□□□□ -0.48
Nr1h4Q60641 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.07□□□□□ -0.48
Nr1h4Q60641 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.07□□□□□ -0.48
Nr1h4Q60641 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.07□□□□□ -0.48
Nr1h4Q60641 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nr1h4Q60641 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.06□□□□□ -0.48
Nr1h4Q60641 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nr1h4Q60641 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nr1h4Q60641 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nr1h4Q60641 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nr1h4Q60641 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nr1h4Q60641 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nr1h4Q60641 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nr1h4Q60641 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nr1h4Q60641 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nr1h4Q60641 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nr1h4Q60641 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nr1h4Q60641 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nr1h4Q60641 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.06□□□□□ -0.48
Nr1h4Q60641 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nr1h4Q60641 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms